This index contains a list of keywords involved in setting up calculations in ACC, and interpreting the results of these calculations. A brief explanation is provided for each keyword.

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Setup keywords

Results keywords

Raw Data Atom Grouping (Atoms, Residues) - in tabs Raw Data, Analyze, Compare, 3D Model Group Property - Depends on Atom Grouping (ResidueName, ChemicalElement, ResidueChargeType), (ResidueName, AtomicComposition, ResidueChargeType) - in tab Analyze Plot Value - in tab Analyze (MinimumCharge = Min, MaximumCharge = Max, Average Charge = Avg, Average Absolute Charge = |Avg|, Median Charge, Median Absolute Charge, Standard Charge Deviation = σ, Standard Abs. Charge Deviation = |σ|) Property Value = Plot Value, in the Analyze graph R² = Pearson, ρ = Spearman, δ² = RMSD, Diff. = sum of absolute differences? Display Charges Show Differences Display Mode - Depends on Atom Grouping: Atoms (Balls and Sticks, Surface, Cartoons, C-α trace, VDW spheres), Residues (Balls and Sticks, Surface)