LiteMol:Use Cases
This page shows instructions for the most typical and most useful operations that LiteMol can perform.
Basics[edit]{{#evt: service=youtube |
id=https://www.youtube.com/watch?v=sG-8uU5gvoI | alignment=center | dimensions=640x480 | autoresize=true | description=Introduction to LiteMol environment, loading a molecular structure, using basic controls and settings, mouse tricks, interactive usage.
}} |
Visual Representations[edit]{{#evt: service=youtube |
id=https://www.youtube.com/watch?v=9EzoWh1_mFI | alignment=center | dimensions=640x480 | autoresize=true | description=How to load electron density data and visualize density isosurfaces.
}} |
Visualization of Electron Density Maps[edit]{{#evt: service=youtube |
id=https://www.youtube.com/watch?v=obOKHFyXftM | alignment=center | dimensions=640x480 | autoresize=true | description=How to visualize electron density maps.
}} |
Biological Assemblies And Crystal Symmetry[edit]{{#evt: service=youtube |
id=https://www.youtube.com/watch?v=n-9yScdVzV8 | alignment=center | dimensions=640x480 | autoresize=true | description=Reconstructing biological assemblies from an asymmetric unit, using crystal symmetry operations to reconstruct neighbors in the crystal lattice.
}} |
Visualizing PDBe Sequence Annotations And Validation Reports[edit]{{#evt: service=youtube |
id=https://www.youtube.com/watch?v=C91ArK0hduU | alignment=center | dimensions=640x480 | autoresize=true | description=How to load sequence annotations from PDBe and use distinctive coloring for the annotated parts of biomolecule structure. How to visualize structure quality using PDBe validation data.
}} |
Using Selections[edit]How to use selection algebra to retrieve particular regions of a structure, such as specific residues, atoms, or chains. The video is being prepared. |