Jump to content

LiteMol:Use Cases: Difference between revisions

From WebChemistry Wiki
Midlik (talk | contribs)
No edit summary
Midlik (talk | contribs)
No edit summary
 
Line 32: Line 32:


{{col-2}}
{{col-2}}
=Visualizing PDBe Sequence Annotations And Validation Reports=
=Visualization of Electron Density Maps=
{{#evt:
{{#evt:
service=youtube
service=youtube
|id=https://www.youtube.com/watch?v=C91ArK0hduU
|id=https://www.youtube.com/watch?v=obOKHFyXftM
|alignment=center
|alignment=center
|dimensions=640x480
|dimensions=640x480
|autoresize=true
|autoresize=true
|description=How to load sequence annotations from PDBe and use distinctive coloring for the annotated parts of biomolecule structure. How to visualize structure quality using PDBe validation data.
|description=How to visualize electron density maps.
}}
}}


{{col-2}}
{{col-2}}
=Biological Assemblies And Crystal Symmetry=
{{#evt:
service=youtube
|id=https://www.youtube.com/watch?v=n-9yScdVzV8
|alignment=center
|dimensions=640x480
|autoresize=true
|description=Reconstructing biological assemblies from an asymmetric unit, using crystal symmetry operations to reconstruct neighbors in the crystal lattice.
}}


{{col-end}}
{{col-end}}


{{col-begin}}


 
{{col-2}}
<br style="clear:both" />
=Visualization of Electron Density Maps=
 
 
 
''The video is being prepared.''
 
 
=Biological Assemblies And Crystal Symmetry=
 
Reconstructing biological assemblies from an asymmetric unit, using crystal symmetry operations to reconstruct neighbors in the crystal lattice.
 
''The video is being prepared.''
 
 
=Visualizing PDBe Sequence Annotations And Validation Reports=
=Visualizing PDBe Sequence Annotations And Validation Reports=
{{#evt:
service=youtube
|id=https://www.youtube.com/watch?v=C91ArK0hduU
|alignment=center
|dimensions=640x480
|autoresize=true
|description=How to load sequence annotations from PDBe and use distinctive coloring for the annotated parts of biomolecule structure. How to visualize structure quality using PDBe validation data.
}}


How to load sequence annotations from PDBe and use distinctive coloring for the annotated parts of biomolecule structure. How to visualize structure quality using PDBe validation data.
{{col-2}}
 
''The video is being prepared.''
 
 
=Using Selections=
=Using Selections=


Line 75: Line 74:


''The video is being prepared.''
''The video is being prepared.''
{{col-end}}

Latest revision as of 13:58, 6 August 2016


This page shows instructions for the most typical and most useful operations that LiteMol can perform.