Editing MotiveValidator (section)

=MotifExtractor =
For  Residue  Validation and  Sugar  Validation,  input  files  may  contain  any  additional structural elements in addition to the validated residue. '''MotiveValidator''' will identify and extract the  validated residues based on the annotations in the model file. Thus you need not process the biomolecule input files before running '''MotiveValidator''' in either of these two validation modes. However, in the case of  Motif/Fragment Validation, the entire structure of each input motif will be compared to the model without checking annotations (residue name and identifier) in the model file. Therefore, you will need to provide the input motifs yourself. To save you time in this task, we provide  MotifExtractor, a simple automated script for extracting the motifs of interest from biomolecule structure files. Instructions on how to run  MotifExtractor on your system can be found on our [[ MotiveValidator:MotifExtractor_Help | web page]].